CDS

Accession Number TCMCG073C40564
gbkey CDS
Protein Id XP_019056892.1
Location join(4033669..4035689,4035807..4035886,4037141..4037328,4037649..4038529,4038614..4038752,4038900..4038959,4039064..4039114,4039266..4039336,4039497..4039648,4039737..4040229,4040382..4041456)
Gene LOC109116246
GeneID 109116246
Organism Tarenaya hassleriana

Protein

Length 1736aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_019201347.1
Definition PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 19-like [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category K
Description Short conserved domain in transcriptional regulators.
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010964        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031935        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032776        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060966        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCGGTTTTCACGGAACCGACTCGGCGAGAGCTTCGATGGAGTCGGTGCAGAGGTCAGAACGTGTTCCTGAGTCGAACGAACCCCATCTCTCGGGAACATGCGGCGATTCCGTCGACGGTGGCATTGATGTCTCCGTCGTGCCTCGGGAACCGTCTTCGGCTGTTAGCGGAGGAGGTGGAGGAGAAGGCGGGGCTGTAAATTCCGGGGCGGAGGTCAGTCATTCGGTTGACGATGGCGCTGTCTTGGAGGTCGTGCCTCTGGAGCCCTCGACGGAGATTGGTGAGGGTGTTCGAGAAGGTGAAGGCGCGAGTATAAGTTCCATCCCGGAGGTTAGTGATTCGGTTTACGGTGGTCCTACCGTGGAGATTGTGCCTATGGAACCATCGTCGGCCATCAACATGACGTGGAACCATCATGTTGATGGTGGCTCTACTGTGAATGTCGTGCAATTCGAACCGTGTCCAAGGATTGGTGAGGGAGGGGAAGGAGGAGTTGCTGCCACAATTGTTCGAGAGGGTAATTCGGTTGCTGAGATGAACGACTCACGGTTTGTTGGAGGGGAAATGGACGTAGAAGCGGCTAATTTGCCAAACTTTGATCGGGAAAAGGATTCTGTTTGCAGAGACAGACAGGAGAAAAAGAATGAATTTTCTGAAAAAGATGAGCCGCTGCCGTTTCCAGTCCTTAGACAAGAAGGTGGAAAGAAGAGAGAAGAGGGCCAAGAGGAGATGGACGGCAGAATTGCGGCTGATGATGAGGGTAATGGAGTGGCAGAGGGCCAGATAGGTCCGATAACAGGGTCAGATGAGACAAATGCTGTAGCTGCGATGGAGGAGGAAGATCCAGGGCAGGTTGCCTCCTTGGCAGATATTGTTGACGAGGGAGAGATTCCTGATGATAAAGAGCTAGCTAGCATTACTGGGTCTACGGAAATTCTTCAGCAGGATAAAGGTTTAGGAGATAGTGCCTGCGAGATAAGAAGCCAATTGGAAGAGAAAGAGCCATCACAAGAGTCACATGATGAAGAAGTTAAGGATTTAACAGATGGAGATGAAAGAGAAGAGACAGATGTCAAAGAAAATGCTATGGATGGTCAGAGTATTCATAGAGCTGAGACTGAGATTAGGGAAAGGGAAGGGGAAGAAAAGAAGACTGATGCTGTGGAGAGAGAAGAGGAGCCTATGTTGGAGATTGAAACTAAGCCTCAGGAGGATGACACAGCAGCAGCTGAGGCTGCAGAGACTGAGACTGGGGAAAGAGGAGAGGAAGAACAACAGGGAGTTGGCAGGAAGAGAGAAGATGTGAATATGTTGGGTACCCAACCTAGACCTCAAGAGATGGACATTGTACCTGGGGAGGCTGCAGAAAAAAATGTTCTGGTGGGTCAATTGTCAACTGATGTTGCCCAGTTTGCTGGAGGAGAAGGAAACAATCAGGAGACTGTTGTGGTTGTTGCGGAGAATATGGTTGTGAAGGATCTTGAAGCTGGTGAATCGGTCAGACATGTTTCTGAATCCACTGAAGAAGTAGAAACTAATGCTGAAAATGTGGCAGATATGGAGAAAGAAGGGAATGTGATCGGTGGTGTTGAAGTAGCAGCACAGATGGTAAATACAGAAGAAGTAGTAGAAGCATCTGAAAAAGTGACTGAAGTAGGGGAAACTAAGAGTACTCAAGTTGAGGAAAAAACTGATGTAAGGACTGAACATGAAGTTGAATTTCAGAAGGAAGCTGATGAGCCCAAAGATATGGAAACACAGGGAGACTCTTCTGTAGCTGATATAGTTGAGGACAGGGAGAACCGTGAGGATACTGAAATGACAGAGACACCGGAGGAGACCATGATGGCCGAGACAGGAGAGGAAGGAGAGGATGTTGAGGAAGAAAATAAGAGCACTGGAGCAAAGAGGAGGCAGGGGAGAAATGCAAAACAGCTGAAAGGGTCGGCAAAGAAGAAAGAGGAAGATGTTTGCTTCATTTGCTTCGATGGTGGTGATCTTGTCCTTTGCGATCGCAGGGGTTGCCCAAAAGCTTACCACCCTTCTTGTGTTGGTCGAGATGAGGCTTTCTTCCATTCAAAGGGTAAATGGAACTGTGGATGGCACCTGTGTAGTAAATGTGAGAAAACTGCGACCTACCTGTGTTACACATGCACGTTTTCTTTATGCAAGGGGTGTGCCAAGGATTCTGTCATCTTTTGTGTAAGAGGCAATAAGGGTTTGTGTGAAACATGTATGGACACAGTCAAGTTGATAGAAAGCAAGGAGCAGGGGAAGAAGGAGCTGGCACAGCTGGATTTTGATGACAAAAGCAGCTGGGAGTATCTTTTTAAGGATTACTGGATTGATCTGAAAGCCCAACTATCTATAACTCAAGAGGAGCTTGATCAGGCTAAAAGCCCTTGGAAAGGGCATGGTACCCAAGCTACTAAACCAGAGACTACCAGCAAGAATAATTATGCAAGTGATGGAGGATCAGATTCCGATAGCCCTCCAAAAAGGAGGAAGACAAGGAGACAATCGAAGTCTGGTGGACAAATCTTATCAGGTAATGATAAAAGTTCATCTGGTGAAAATGTTGACTGGGCTTCCAAGGAACTCTTGGATGTTGTTGTGCACATGAGGCATGGGGACAGATCCTTCTTACCTCAGTCAGAAGTACATAGTCTCCTACTAGACTATATAAAGAGATACAATCTTCGTGACCCTCGTCGGAAAAGCCAAGTCATTTGTGACTCCAGGCTTCAGAATCTGTTCGGAAAATCACACGTGGGGCACTTTGAGATGTTAAATCTCCTCGATTCTCATTTTCTTATCAAGAAGGAATCTCATGCAGAGGACGTTCAAAGTACCGTAGTTGATACAGAAGCTGATCATGTTGATGCTGATGAAAGCTTGGATTACCCGACAAAAACTGGAAAGGATAAGAAACGCAAAACTCGCAGAAAGGGTGGCAGTAGGGGACAACAGTCTAATCTGGATGATTTTGCAGCAATTGATATGCATAACATTAATTTGATATACTTGAGGAGGAGCTTGGTGGAGGATCTGCTTGAAGATCCTTCATCATTCCAAGAAAAAGTGGTCGGTGCATTTGTTAGGTTAAGAATATCTGGCAATCAAAAGCAAGATTTGTACCGATTGGTTCAAGTTGCCGGTAATGTTTTGCACCCGTGCCACTGAACCAAATCTGCTGAACCATATAAGGTTGGCAAAAAAACAACTGACTTTGTACTCGAGATATTGAACCTGGACAAAACAGAAGTGATATCTATTGACATTATATCAAATCAAGATTTCACTGAGGATGAATGCAAACGTCTAAGGCAGAGCATAAAGTGTGGATTTATTAGCAGGCTGACAGTGGGTGGTATTCAAGAAAAAGCAATTGCTTTGCAGGAAGTGAGAGTTAAAAATTTGCTGGAAGGAGAGATTGTGCGACTGAGTCATTTGCGTGATCGTGCCAGTGATATGGGCCGCAGAAAAGAGCTTCGAGAGTGTGTTGAGAAATTGCAAGTGCTAAAGTCTCCAGAGGAACGCCAGCGGAGGTTAGAAGAAATTCCAGAGATACATGTTGATCCTAGTATGGATCCAGATTGTGAATCTGAGGATGAAGAAGAAAAAGAAGAGAAGCAAAGAGAGAAATATCTCAGGCCTCGTAGCAGTAGCTTCAACAGAAGAGGACGGGAACCGATATCTCCAAGAACAGGAGGATATGGTTCGAGTTATTCATGGGGTGGCACAAAAACCAATTCAAGCGGGAACCGTGAACTAAGCAAAAATCTGTCTGGTAGAGGTTTTTCTAGTAGAGGGGATAATCCTGTCGGTGAATCCGAAGATAGAGCCAATGAAAGTATGTGGACTTCAGGCAGAGACAGAGAATTGCAACAATCTGCAAGCCCTGAGAAGCCAGGATCTGTTTCTCGGAGTTCCCATCATGTTGGAACAGCAGAGTTGTCTCCTAGGGTAGGGTCAGAAATTTCACCTGCACCTCTACCTACATCTGTCCCTGAACCTGTTTCCCAGATTAATGAATCGGAAAAGATGTGGTATTACAAGGACCCGTCGGGTAAAGTACAAGGACCTTTCTCGATGGTGCAGCTCCGTAAATGGAACAACACTGGATACTTTCCCCTGTCTGTTGGAGGAATGAAATCTGACCCTGAATTTGGTTCCAGTGGCAGGACTTCTCCATCAACCCTTGAAATTCCGAAGTCTCAGGATAATACTTGGGGTCCGAGGTCAGGTTCAGGCACAAACCTTCCGTCCCCTACTCCAAATCAAACCATGTCTCCAACCGCAGCAAGGAGACGGAGTTATGAGAGCAGATGGTCCCCGACTCCTGCTCAGGCGCCTGTCCAGTCGACTGTTCAGTTAGCAAACTCTTCTATTCCACCATCTGCCACAAATCCAGTTTCCGCCAGGCCTGATGTCCCAATGACTCATCTTGGTCCTGCTATGGCTCTTCCATCTCCGACACCGGGTGGCCTAAATCAGGGCCGGGGAACCATGCAGGCCGAGAAACTGGATTCCAGTGGTTCTACTCAGATTCCATCTCATGGTTACCGGGGCAATGCTCCATCTTCTTCCCAGAGTTCCTCCCCATCTTTCAATGCAGGAACTCCAGGTCTCTTCCCTGCACAGTTTCAATCCGGTATTCCTCCATCTGATTCATGGAGGGTTCCAGTTCCGATTCAACCAAACACTCAGGCACCTGTGCCACTGAACCTACCTTGGGGCATGAATGCAATGAATAGCAACGACCAAAACGCTCCACAAACGCAGGCTCCGGCGATTCAAAGCAGTGGTTGGGGACAGATGCCTGTAAATCCGAACATGGGATGGATGGGGACCCCGCAAGCCGGAGCAAACCCGAATTGGGGATCTTACAGTTGGGGAGGGCAACCGCAGGTGTATCCTAATCCCGGGTGGGGTATGACAGGTCAAGCTCAAGCTCCAGTGAATACTGGCTCGGGTAACGGACCGAAAACAGGCAACGGAAATCCGAACTGGGGTTCGATCAGCCATGGCCCAACACCAGGTGGTGCTGCAGCAATGTGGGGAAACAAACAGAACCAGAACGGAGGAGGAGATAGTACTGCTGGTTATGGTTGGAACAGAAACTTGAATGGACAGAGAATATGCAAGTTCTTCAGAGAAAATGGTTACTGTAGGAAAGGAGCATCCTGCGATTACATCCATAACTAA
Protein:  
MGGFHGTDSARASMESVQRSERVPESNEPHLSGTCGDSVDGGIDVSVVPREPSSAVSGGGGGEGGAVNSGAEVSHSVDDGAVLEVVPLEPSTEIGEGVREGEGASISSIPEVSDSVYGGPTVEIVPMEPSSAINMTWNHHVDGGSTVNVVQFEPCPRIGEGGEGGVAATIVREGNSVAEMNDSRFVGGEMDVEAANLPNFDREKDSVCRDRQEKKNEFSEKDEPLPFPVLRQEGGKKREEGQEEMDGRIAADDEGNGVAEGQIGPITGSDETNAVAAMEEEDPGQVASLADIVDEGEIPDDKELASITGSTEILQQDKGLGDSACEIRSQLEEKEPSQESHDEEVKDLTDGDEREETDVKENAMDGQSIHRAETEIREREGEEKKTDAVEREEEPMLEIETKPQEDDTAAAEAAETETGERGEEEQQGVGRKREDVNMLGTQPRPQEMDIVPGEAAEKNVLVGQLSTDVAQFAGGEGNNQETVVVVAENMVVKDLEAGESVRHVSESTEEVETNAENVADMEKEGNVIGGVEVAAQMVNTEEVVEASEKVTEVGETKSTQVEEKTDVRTEHEVEFQKEADEPKDMETQGDSSVADIVEDRENREDTEMTETPEETMMAETGEEGEDVEEENKSTGAKRRQGRNAKQLKGSAKKKEEDVCFICFDGGDLVLCDRRGCPKAYHPSCVGRDEAFFHSKGKWNCGWHLCSKCEKTATYLCYTCTFSLCKGCAKDSVIFCVRGNKGLCETCMDTVKLIESKEQGKKELAQLDFDDKSSWEYLFKDYWIDLKAQLSITQEELDQAKSPWKGHGTQATKPETTSKNNYASDGGSDSDSPPKRRKTRRQSKSGGQILSGNDKSSSGENVDWASKELLDVVVHMRHGDRSFLPQSEVHSLLLDYIKRYNLRDPRRKSQVICDSRLQNLFGKSHVGHFEMLNLLDSHFLIKKESHAEDVQSTVVDTEADHVDADESLDYPTKTGKDKKRKTRRKGGSRGQQSNLDDFAAIDMHNINLIYLRRSLVEDLLEDPSSFQEKVVGAFVRLRISGNQKQDLYRLVQVAGNVLHPCHXTKSAEPYKVGKKTTDFVLEILNLDKTEVISIDIISNQDFTEDECKRLRQSIKCGFISRLTVGGIQEKAIALQEVRVKNLLEGEIVRLSHLRDRASDMGRRKELRECVEKLQVLKSPEERQRRLEEIPEIHVDPSMDPDCESEDEEEKEEKQREKYLRPRSSSFNRRGREPISPRTGGYGSSYSWGGTKTNSSGNRELSKNLSGRGFSSRGDNPVGESEDRANESMWTSGRDRELQQSASPEKPGSVSRSSHHVGTAELSPRVGSEISPAPLPTSVPEPVSQINESEKMWYYKDPSGKVQGPFSMVQLRKWNNTGYFPLSVGGMKSDPEFGSSGRTSPSTLEIPKSQDNTWGPRSGSGTNLPSPTPNQTMSPTAARRRSYESRWSPTPAQAPVQSTVQLANSSIPPSATNPVSARPDVPMTHLGPAMALPSPTPGGLNQGRGTMQAEKLDSSGSTQIPSHGYRGNAPSSSQSSSPSFNAGTPGLFPAQFQSGIPPSDSWRVPVPIQPNTQAPVPLNLPWGMNAMNSNDQNAPQTQAPAIQSSGWGQMPVNPNMGWMGTPQAGANPNWGSYSWGGQPQVYPNPGWGMTGQAQAPVNTGSGNGPKTGNGNPNWGSISHGPTPGGAAAMWGNKQNQNGGGDSTAGYGWNRNLNGQRICKFFRENGYCRKGASCDYIHN